Structure of PDB 8s8h Chain D

Receptor sequence

>8s8hD (length=227) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

AIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRA
TKVQDVVGENGRRINELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQA
ESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVISGKLRAARAKSMKF
ADGFLIHSGQPVNDFIETATRHVLLRQGVLGIKVKIMKDPSRNTSGPKAL
PDAVTIIEPKEEEPVLEPSVKDYRPTE

3D structure

PDB

8s8h Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

4.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	D	I4 I5 S6 K7 R9 R27 S139 G140 K141 A145 R146 A147 L157 I158 H159 S160 G161 Q162 L176 Q179 V181 P203 D204	I2 I3 S4 K5 R7 R25 S137 G138 K139 A143 R144 A145 L155 I156 H157 S158 G159 Q160 L174 Q177 V179 P201 D202
BS02	rna	D	R116 R143 R146	R114 R141 R144

External links

PDB	RCSB:8s8h, PDBe:8s8h, PDBj:8s8h
PDBsum	8s8h
PubMed	39193907
UniProt	Q6CRK7

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