Structure of PDB 8rph Chain D

Receptor sequence

>8rphD (length=608) Species: 1198452 (Janthinobacterium sp. HH01) [Search protein sequence]

DNKVKVAELVAEALENLGIQHAFGIIGAGNVHLFEAIARRGYTEIVCVHH
EQAACMAVQTYYRTNGRIAAALLTTGAGSTNGVTGVVSAWADSIPCIVIA
GNENSKFTFPENPLRMWGVQGYDSCQMVERVSKYQMRVTKMERAVYELEK
GVHLALEGRPGPTWIEIPMDIQSGRIDPATLEHYVAPPAPDYLTPAVAAQ
VDSVLAALAKAERPVLWLGNGIRLAGGERLLKPLLEKLGSPALVSWAGID
MLDSSHPLVFGRAGVYGQRAANFILQNSDYVLAIGTRLAIPQIGYDLNEL
ARLARIDVVDIDGDEAIKHAKRTQENIVCDARVFIEALLARLNAADAPAI
ASKADWVAKCRAYEEQFPWVGAEHADPEGFINSYRFMERLNGFFKDDQVV
VTDMGTALLSGHQVLRFKEGQRFMTSTGLGEMGYGLPAALGVSFANDRGE
VMCLNCDGGMMMNLQELQTMVHHNLPIKLFIFNNDGYLMIKHTQKSLFKS
DYVGTDRKSGVSCPDFSRLAAAFDIPAYQIRGWDECDATLAKVQAHTGPV
ICEVFMHPQQLFSPKLGVVSRADGTLVSPPLEDLSPLIPRDVLEQAMIGG
MHEKSKTL

3D structure

PDB

8rph JhE from Janthinobacterium sp. HH01

Chain

Resolution

2.96 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	A1H2A	D	I28 E53	I26 E51
BS02	FAD	D	R161 G221 N222 G223 S247 W248 A249 A265 G266 Y268 G287 T288 R289 P293 Q294 D312 I313 D332 A333 T429	R159 G219 N220 G221 S245 W246 A247 A263 G264 Y266 G285 T286 R287 P291 Q292 D310 I311 D330 A331 T427
BS03	MG	D	D459 N486 G488	D457 N484 G486
BS04	A1H2A	D	G407 T408 G432 M434 C458 G460 G461 N486 G488 Y489 L490 M491 I492	G405 T406 G430 M432 C456 G458 G459 N484 G486 Y487 L488 M489 I490

External links

PDB	RCSB:8rph, PDBe:8rph, PDBj:8rph
PDBsum	8rph
PubMed	38874074

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