Structure of PDB 8pmi Chain D

Receptor sequence

>8pmiD (length=408) Species: 39946 (Oryza sativa Indica Group) [Search protein sequence]

YFLWPTSNLQHCAAEGRANYFGNLQKGLLPRHPGRLPKGQQANSLLDLMT
IRAFHSKILRRFSLGTAVGFRIRKGDLTDIPAILVFVARKVHKKWLNPAQ
CLPAILEGPGGVWCDVDVVEFSYYGAPAQTPKEQMFSELVDKLCGSDECI
GSGSQVASHETFGTLGAIVKRRTGNKQVGFLTNRHVAVDLDYPNQKMFHP
LPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFAD
DFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTTGT
VMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKP
RPIGIIWGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNES
LQDAVQQQ

3D structure

PDB

8pmi The catalytic triad of rice NARROW LEAF1 involves H234

Chain

Resolution

2.83 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	ATP	D	R120 I121 R122 K123 K139 V140 H141 K142 L145 D166 V167	R71 I72 R73 K74 K90 V91 H92 K93 L96 D117 V118
BS02	MG	D	I121 D166	I72 D117

External links

PDB	RCSB:8pmi, PDBe:8pmi, PDBj:8pmi
PDBsum	8pmi
PubMed	38600265
UniProt	B4XT64\|NAL1_ORYSJ Protein NARROW LEAF 1 (Gene Name=NAL1)

[Back to BioLiP]