Structure of PDB 8p7n Chain D

Receptor sequence
>8p7nD (length=326) Species: 293 (Brevundimonas diminuta) [Search protein sequence]
RINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRAALVEKAVR
GLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWEDPP
LSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATNGKATPFQELVLR
AAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTD
DLSYLTALAARGYLIGLDGIPHSAIGLEDNASASALLGNRSWQTRALLIK
ALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDSVNPDGMAFIPLRVIPF
LREKGVSQETLAGITVTNPARFLSPT
3D structure
PDB8p7n The impact of molecular variants, crystallization conditions and the space group on ligand–protein complexes: a case study on bacterial phosphotriesterase
ChainD
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.8.1: aryldialkylphosphatase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN D H55 H57 D301 H20 H22 D266
BS02 ZN D H201 H230 H166 H195
Gene Ontology
Molecular Function
GO:0004063 aryldialkylphosphatase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0016788 hydrolase activity, acting on ester bonds
GO:0046872 metal ion binding
Biological Process
GO:0009056 catabolic process
Cellular Component
GO:0005886 plasma membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8p7n, PDBe:8p7n, PDBj:8p7n
PDBsum8p7n
PubMed37860961
UniProtP0A434|OPD_BREDI Parathion hydrolase (Gene Name=opd)

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