Structure of PDB 8oel Chain D

Receptor sequence
>8oelD (length=286) Species: 29292 (Pyrococcus abyssi) [Search protein sequence]
SLMRISELYPGMDPREVNVVGRVLKKYPPREYTRKDGSVGRVASLIIYDD
SGRARVVLWDAKVSEYYNKIEVGDVIKVLDAQVKESLSGLPELHINFRAR
IILNPDDPRVEMITRKKIKDIEAGDRFVEVRGTIAKVYRVLTYDACPECK
KKVDYDEGLGVWICPEHGEVQPIKMTILDFGLDDGTGYIRVTLFGDDAEE
LLGVSPEEIAEKIKELEESGLTTKEAARKLAEDEFYNIIGREIVVRGNVI
EDRFLGLILRASSWEDVDYRREIERIKEELEKLGVM
3D structure
PDB8oel DNA-binding mechanism and evolution of replication protein A.
ChainD
Resolution8.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D V100 R211 Y215 K223 K224 I249 F266 K296 D324 F326 L327 R332 V39 R139 Y143 K151 K152 I177 F194 K224 D252 F254 L255 R260
BS02 ZN D C218 C221 H239 C146 C149 H167
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000724 double-strand break repair via homologous recombination
GO:0010212 response to ionizing radiation

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Molecular Function
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Biological Process
External links
PDB RCSB:8oel, PDBe:8oel, PDBj:8oel
PDBsum8oel
PubMed37087464
UniProtG8ZHS0

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