Structure of PDB 8jkk Chain D

Receptor sequence
>8jkkD (length=383) Species: 240176 (Coprinopsis cinerea okayama7#130) [Search protein sequence]
LPSLLLIDEAAAVLGRMIQGLRTGIPYIHTENDSIKANPILRTALWQAAY
VLEKAYRRRYRVPWTARRYMRELTPRQDGRNANREAVMAKEFPPGAELNS
DHPVQEILPAMIIDAEDHILFCYLPSCVSPAIMTIIDAAVGTLATTKDGH
LQKKSRAREGERARVEMQKVLGANWREALDLFRQGACKMTPGVLTFAPAW
WPVGHENQLPGPASTLKPPKGEGRMFLSDIPIASALVGAILAQINQPLFE
SGVKVLRELYSNSKLTKDHSTVSKIIEIWFSPFSSLSLIVNRATPIHRDT
SGPIEGMDILVTGGNYSNGVLVTPSFNRRWTYNPGCVVALLGKLVLHGVP
EVDGERYCMAHFWRERLFDAAGVPFPYPSKWQE
3D structure
PDB8jkk Molecular basis of an atypical dsDNA 5mC/6mA bifunctional dioxygenase CcTet from Coprinopsis cinerea in catalyzing dsDNA 5mC demethylation.
ChainD
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D R92 R96 A202 N203 R205 W229 P231 V232 H234 A242 S243 S330 F391 R393 R76 R80 A173 N174 R176 W200 P202 V203 H205 A213 S214 S301 F362 R364
BS02 dna D T90 R92 N97 K169 G233 H234 T74 R76 N81 K153 G204 H205
BS03 MN D H326 D328 H376 H297 D299 H347
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8jkk, PDBe:8jkk, PDBj:8jkk
PDBsum8jkk
PubMed38324471
UniProtA8P1J0

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