Structure of PDB 8ili Chain D

Receptor sequence
>8iliD (length=177) Species: 10498 (African swine fever virus BA71V) [Search protein sequence]
GGGMLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKML
NDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKVCGERKCVLFIEWEKKTY
QLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQT
LVPLKITTEKELIKELGFTYRIPKKRL
3D structure
PDB8ili Structural Insight into Polymerase Mechanism via a Chiral Center Generated with a Single Selenium Atom.
ChainD
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D G82 R84 I124 R127 K131 K136 L137 N138 Q139 Y140 G85 R87 I127 R130 K134 K139 L140 N141 Q142 Y143
BS02 dna D H115 F116 V120 H118 F119 V123
BS03 MG D D49 D51 D100 D52 D54 D103
BS04 MG D D49 D51 D52 D54
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006259 DNA metabolic process
GO:0006281 DNA repair
GO:0006303 double-strand break repair via nonhomologous end joining
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0044423 virion component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ili, PDBe:8ili, PDBj:8ili
PDBsum8ili
PubMed37958741
UniProtP42494|DPOLX_ASFB7 Repair DNA polymerase X (Gene Name=Ba71V-97)

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