Structure of PDB 8idq Chain D

Receptor sequence
>8idqD (length=446) Species: 128442 (Talaromyces pinophilus) [Search protein sequence]
WSYSQTLSANIQVNALQRYQEMIGGGCSGAFGWACQQFPTTGLTPENQEE
VTKILFDENIGGLSIVRNDIGSSPGSTILPTCPATPAGPFNYQWDGSDSC
QFNLTKTALKYNPELYVYANAWSAPGCMKTVGTENDGGQICGVRGTNCTY
DWRQAYADYLVQYVKFYQAEGIDISLLGAWNEPDFNPVTYESMESDGFQA
KDFLEILYPTVKKAFPNLDVSCCDATGARQERNILYEVQQAGGEHFFDVA
TWHNYQSSPERPFNVVGKPNIMTEWADGSGPWNTTWDVSGQLAEGLQWAL
YMHNAFTNSDTSGYNHWWCAGGGADNVLISITGNSYEVSSRLWAFASYFR
FARPGSVRIGATSSVENVYVSAYENKNGTVSIPVINAAHFPYEVTIDLQG
LKARKRVSTFLTDNSHNVTLMDQSELHGSVLKATVPPRAVQVFWLE
3D structure
PDB8idq Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
ChainD
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN D R366 L436 R350 L420
BS02 XYP D E198 Y271 Q272 E182 Y255 Q256
Gene Ontology
Molecular Function
GO:0004348 glucosylceramidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0006665 sphingolipid metabolic process
GO:0045493 xylan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8idq, PDBe:8idq, PDBj:8idq
PDBsum8idq
PubMed37144255
UniProtA0A0B8MZ29

[Back to BioLiP]