Structure of PDB 8gxb Chain D

Receptor sequence
>8gxbD (length=90) Species: 9606 (Homo sapiens) [Search protein sequence]
RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF
VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAK
3D structure
PDB8gxb Structure-based investigations of the NAD+-II riboswitch.
ChainD
Resolution2.15 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D Y12 N14 N15 E18 K21 S47 L48 K49 M50 R51 Q53 F55 K79 Q84 K87 D89 S90 D91 Y7 N9 N10 E13 K16 S42 L43 K44 M45 R46 Q48 F50 K74 Q79 K82 D84 S85 D86
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:8gxb, PDBe:8gxb, PDBj:8gxb
PDBsum8gxb
PubMed36610789
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

[Back to BioLiP]