Structure of PDB 8g6h Chain D

Receptor sequence
>8g6hD (length=95) Species: 8355 (Xenopus laevis) [Search protein sequence]
KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRL
AHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTCYTSAK
3D structure
PDB8g6h Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
ChainD
Resolution3.06 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D T29 Y39 S52 S53 R83 T85 T2 Y12 S25 S26 R56 T58
BS02 dna D R30 Y37 R3 Y10
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8g6h, PDBe:8g6h, PDBj:8g6h
PDBsum8g6h
PubMed39149911
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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