Structure of PDB 8ffr Chain D

Receptor sequence
>8ffrD (length=418) Species: 11294 (Rabies virus CVS-11) [Search protein sequence]
IVFKVNNQVVSLKPEIIVDQHEYKYPAIKDLKKPCITLGKAPDLNKAYKS
VLSGMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKITP
GSLVEIKRTDVEGNWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKISG
QNTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRF
LAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTARE
AILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAV
GHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTF
ERRFFRDEKELQEYEAAETRSPEAVYTRIMMNGGRLKRSHIRRYVSVSSN
HQARPNSFAEFLNKTYSS
3D structure
PDB8ffr Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
ChainD
Resolution3.49 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D R149 N157 Y161 R168 I172 A223 R225 V226 V230 D235 S237 R290 K297 S298 S301 S302 R323 N326 A327 T328 R434 R144 N152 Y156 R163 I167 A218 R220 V221 V225 D230 S232 R285 K292 S293 S296 S297 R318 N321 A322 T323 R404
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8ffr, PDBe:8ffr, PDBj:8ffr
PDBsum8ffr
PubMed36560817
UniProtA8VR20

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