Structure of PDB 8dt6 Chain D

Receptor sequence
>8dt6D (length=371) Species: 1338011 (Elizabethkingia anophelis NUHP1) [Search protein sequence]
MKFIVASGELQKALQTVSGVISGSQSRPILENFLFELENDNLKITASDGE
TTLITSIPVKSENNGRMAVPAKMFLDVIKSFGDQPLTFVEKEGSLLEILD
EKDNYFVALDNAEDYPELPEFDASKSVKIQAGILSEALVNTLFATSNDSL
RPVMTGVLFQFNENEANFVSTDSHRLVVYNRKDVMNVDNIEFIMPKKPLA
IIKNILSNTDDEVLIEFNENMAKFSFQDNIWICRLIDGKYPNYTAVIPKE
NPNVLTINRNLLLSSIRRASIFSNKSTNQVRFKLSGNLLHLHAEDTEYAN
KADMQIPCEYNGEDINIGFSSKFLTEMLSVLGSDDITMKMSQPNRPGIIE
PVDGLEENESILMLSMPVIGL
3D structure
PDB8dt6 Crystal Structure of DNA Polymerase III beta subunit from Elizabethkingia anophelis
ChainD
Resolution2.35 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA D D40 S61 D40 S61
BS02 CA D E168 N194 E163 N189
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8dt6, PDBe:8dt6, PDBj:8dt6
PDBsum8dt6
PubMed
UniProtA0A077EHW1

[Back to BioLiP]