Structure of PDB 8dr1 Chain D

Receptor sequence
>8dr1D (length=343) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
RKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH
MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV
KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETY
SGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENV
KCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA
GVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYIT
NDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL
3D structure
PDB8dr1 Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
ChainD
Resolution2.14 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D I103 R107 I93 R97
BS02 AGS D R154 P179 R183 R144 P169 R173
BS03 AGS D V28 R32 P33 T40 P67 G68 T69 G70 K71 T72 S73 L192 L228 R229 V18 R22 P23 T30 P57 G58 T59 G60 K61 T62 S63 L182 L218 R219
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003689 DNA clamp loader activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0000076 DNA replication checkpoint signaling
GO:0000077 DNA damage checkpoint signaling
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0006272 leading strand elongation
GO:0006281 DNA repair
GO:0006298 mismatch repair
GO:0007062 sister chromatid cohesion
GO:0007064 mitotic sister chromatid cohesion
GO:0090618 DNA clamp unloading
Cellular Component
GO:0005634 nucleus
GO:0005663 DNA replication factor C complex
GO:0031389 Rad17 RFC-like complex
GO:0031390 Ctf18 RFC-like complex
GO:0031391 Elg1 RFC-like complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dr1, PDBe:8dr1, PDBj:8dr1
PDBsum8dr1
PubMed35939393
UniProtP40348|RFC2_YEAST Replication factor C subunit 2 (Gene Name=RFC2)

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