Structure of PDB 8dqj Chain D

Receptor sequence
>8dqjD (length=271) Species: 1291540 (Methanomethylophilus alvi) [Search protein sequence]
GTVKYTDAQIQRLREYGNGTYEQKVFEDLASRDAAFSKEMSVASTDNEKK
IKGMIANPSRHGLTQLMNDIADALVAEGFIEVRTPIFISKDALARMTITE
DKPLFKQVFWIDEKRALRPMLAPNLYSVMRDLRDHTDGPVKIFEMGSCFR
KEMHLEEFTMLSLCDMGPRGDATEVLKNYISVVMKAAGLPDYDLVQEESD
VYKETIDVEINGQEVCSAAVGPHYLDAAHDVHEPTSGAGFGLERLLTIRE
KYSTVKKGGASISYLNGAKIN
3D structure
PDB8dqj Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity.
ChainD
Resolution1.54 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D R150 E152 H158 L159 F162 E218 V219 C220 S221 G243 G245 R248 R150 E152 H154 L155 F158 E214 V215 C216 S217 G239 G241 R244
BS02 T7Q D M120 A122 Y126 C168 Y206 S221 G241 G243 M120 A122 Y126 C164 Y202 S217 G237 G239
BS03 MG D E218 S221 E214 S217
Gene Ontology
Molecular Function
GO:0004812 aminoacyl-tRNA ligase activity
GO:0005524 ATP binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8dqj, PDBe:8dqj, PDBj:8dqj
PDBsum8dqj
PubMed36395426
UniProtA0A3G3IHP7

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