Structure of PDB 8dba Chain D

Receptor sequence

>8dbaD (length=510) Species: 1063 (Cereibacter sphaeroides) [Search protein sequence]

MGIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVR
DHGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSEV
AEILEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFD
WLKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLR
IVKYRGTAHGTNEYPFLIDTDGFSVLPVSALGLLHQVHEERIASGVPDLD
AMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEA
ADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRF
EPSVVVLDPISAFTGDRLEVQSMLLRIVDFLKNRGITGIFTHLLSSLMDG
WVLMLNREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGE
GGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEA
ELQAEEIALK

3D structure

PDB

8dba From primordial clocks to circadian oscillators.

Chain

Resolution

3.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

2.7.11.1: non-specific serine/threonine protein kinase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	ADP	D	G34 G36 K37 T38 L39 S74 L75 R201 I222	G34 G36 K37 T38 L39 S74 L75 R197 I218
BS02	ADP	D	A274 G277 K278 S279 S280 S314 L315 R433 M454	A270 G273 K274 S275 S276 S310 L311 R415 M436
BS03	ADP	D	K207 T211 A212 H213	K203 T207 A208 H209
BS04	ADP	D	K439 A440 R441 M443 A444 H445	K421 A422 R423 M425 A426 H427

Gene Ontology

	Molecular Function
GO:0005524	ATP binding
GO:0016887	ATP hydrolysis activity

View graph for
Molecular Function

External links

PDB	RCSB:8dba, PDBe:8dba, PDBj:8dba
PDBsum	8dba
PubMed	36949197
UniProt	B9KWX8

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