Structure of PDB 8db7 Chain D

Receptor sequence
>8db7D (length=304) Species: 5722 (Trichomonas vaginalis) [Search protein sequence]
MKLWIDTDCGIDDATAILICLANPSIEIVGISCIGGNASLQNVIRNVNRT
LKVWGKTDIPIFGGCQAPLVQPKMEIPHIHGGDGLGDINDNDFGTNTPNK
LEKEHAVNALIHAANTIEDLNILCLAPLTNIAIALSMAPEAILKIKHFYI
MGGAENGKGNITPYGEFNWRADPEAAQIVLQTYPQYQTTIASWTLAVFNS
FNANDYDFFNLDGNLVRRFIRETWKPIIAFDGGRICPADPLAAFIAVYGD
RAIKRAERLHLSMVLEGEKLGMSLAEPDEKGCLVVKECDAELFVKILREL
QDHQ
3D structure
PDB8db7 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase.
ChainD
Resolution2.33 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 R2O D D12 I79 N160 I161 W193 I227 F230 D231 D12 I79 N160 I161 W193 I227 F230 D231
BS02 CA D D8 D13 L125 D239 D8 D13 L125 D239
Gene Ontology
Molecular Function
GO:0008477 purine nucleosidase activity
GO:0016787 hydrolase activity
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0046872 metal ion binding
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0006152 purine nucleoside catabolic process
Cellular Component
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:8db7, PDBe:8db7, PDBj:8db7
PDBsum8db7
PubMed35994320
UniProtA2EYV3

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