Structure of PDB 8d29 Chain D

Receptor sequence

>8d29D (length=224) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVAS
ISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQG
YRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT
QTYICNVNHKPSNTKVDKKVEPKS

3D structure

PDB

8d29 Discovery of small molecules that target a tertiary-structured RNA.

Chain

Resolution

1.81 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	D	Y34 Y57 S58 S60 Q102 Y104 R105 R106 R110	Y31 Y54 S55 S57 Q99 Y101 R102 R103 R107

External links

PDB	RCSB:8d29, PDBe:8d29, PDBj:8d29
PDBsum	8d29
PubMed	36413497

[Back to BioLiP]