Structure of PDB 8cpl Chain D

Receptor sequence
>8cplD (length=456) Species: 1280,83333 [Search protein sequence]
SALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVT
AGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQ
NQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAAL
KLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFR
HVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVR
KLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMP
IGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQ
AEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEM
FRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEQ
QNAFYE
3D structure
PDB8cpl Engineered imaging scaffolds for cryo-EM of small proteins of interest.
ChainD
Resolution1.605 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.6.1.29: diamine transaminase.
2.6.1.82: putrescine--2-oxoglutarate transaminase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP D S149 G150 T151 F180 H181 G182 E238 D271 V273 Q274 K300 S141 G142 T143 F172 H173 G174 E230 D263 V265 Q266 K292
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0019161 diamine transaminase activity
GO:0030170 pyridoxal phosphate binding
GO:0033094 putrescine--2-oxoglutarate transaminase activity
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
Biological Process
GO:0009447 putrescine catabolic process
GO:0019477 L-lysine catabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:8cpl, PDBe:8cpl, PDBj:8cpl
PDBsum8cpl
PubMed
UniProtP38507|SPA_STAAU Immunoglobulin G-binding protein A (Gene Name=spa);
P42588|PAT_ECOLI Putrescine aminotransferase (Gene Name=patA)

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