Structure of PDB 8cm6 Chain D

Receptor sequence

>8cm6D (length=214) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence]

GKMFFVDLSRCTACRGCQIACKQWKNLPAEETRNTGSHQNPPDLSYVTLK
TVRFTEKSRKGPGIDWLFFPEQCRHCVEPPCKGQADVDLEGAVVKDETTG
AVLFTELTAKVDGESVRSACPYDIPRIDPVTKRLSKCDMCNDRVQNGLLP
ACVKTCPTGTMNFGDEQEMLALAEKRLAEVKKTYPGAVLGDPNDVRVVYL
FTRDPKDFYEHAVA

3D structure

PDB

8cm6 W-formate dehydrogenase C872A from Desulfovibrio vulgaris - with Formamide

Chain

Resolution

1.416 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	ARF	D	R60 P63	R59 P62
BS02	SF4	D	C12 T13 A14 C15 R16 C18 C157 P158 T159 T161 M162	C11 T12 A13 C14 R15 C17 C156 P157 T158 T160 M161
BS03	SF4	D	C74 R75 C77 P80 P81 C82 V103 C121 I125 P126 K137	C73 R74 C76 P79 P80 C81 V102 C120 I124 P125 K136
BS04	SF4	D	F5 C22 K26 K51 C138 D139 M140 C141 C153	F4 C21 K25 K50 C137 D138 M139 C140 C152

Gene Ontology

	Molecular Function
GO:0046872	metal ion binding
GO:0051539	4 iron, 4 sulfur cluster binding

View graph for
Molecular Function

External links

PDB	RCSB:8cm6, PDBe:8cm6, PDBj:8cm6
PDBsum	8cm6
PubMed	37985883
UniProt	Q72EJ0

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