Structure of PDB 8c7u Chain D

Receptor sequence
>8c7uD (length=262) Species: 226185 (Enterococcus faecalis V583) [Search protein sequence]
GAMATLLEKTRQVNELLQKNNLFDVQAELPYNKMAMILGDILESNAYIIS
SSGDLLGYTEKLDVNNARIKNMFKEKKFPQGYTEAVDMLKVTEANIPIDS
DLTAFPFESRELYPFGLTTIVPLYGAGKRLGTIILARVEKSFNEDDLVLA
EYSATVVGMQILYHQSRTIEAEVRSATAVQMAINTLSYSELKAVHAIFEA
LDGEEGRLTASSIADEIGITRSVIVNALRKLESAGIIESRSLGMKGTYLK
VLNQQFIKELEK
3D structure
PDB8c7u Structural insights into CodY activation and DNA recognition.
ChainD
Resolution3.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D A208 S209 V223 R227 S239 G241 M242 G244 T245 A210 S211 V225 R229 S241 G243 M244 G246 T247
BS02 dna D S185 S187 T218 S220 S239 L240 G241 M242 K243 S187 S189 T220 S222 S241 L242 G243 M244 K245
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0005525 GTP binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription
Cellular Component
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:8c7u, PDBe:8c7u, PDBj:8c7u
PDBsum8c7u
PubMed37326020
UniProtQ834K5

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