Structure of PDB 8bh4 Chain D

Receptor sequence
>8bh4D (length=177) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFR
3D structure
PDB8bh4 Modulation of translational decoding by m 6 A modification of mRNA.
ChainD
Resolution2.62 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D N37 M38 G39 V40 G41 T68 R71 K72 F77 K88 S121 D123 S129 G151 L152 N36 M37 G38 V39 G40 T67 R70 K71 F76 K87 S120 D122 S128 G150 L151
BS02 rna D S24 M26 Q63 K64 L66 K69 T90 R92 S23 M25 Q62 K63 L65 K68 T89 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8bh4, PDBe:8bh4, PDBj:8bh4
PDBsum8bh4
PubMed37553384
UniProtP62399|RL5_ECOLI Large ribosomal subunit protein uL5 (Gene Name=rplE)

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