Structure of PDB 8b0i Chain D

Receptor sequence
>8b0iD (length=282) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREIS
AAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTR
RLHPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRT
RLLGKRERELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTG
LDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGG
KHRSVYIAEQLADYFRSRGKNVQSRHRTLEKR
3D structure
PDB8b0i Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
ChainD
Resolution4.28 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D R184 R238 R184 R238
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0042802 identical protein binding
GO:0060090 molecular adaptor activity
GO:0097367 carbohydrate derivative binding
Biological Process
GO:0050779 RNA destabilization
GO:0051289 protein homotetramerization
Cellular Component
GO:0032991 protein-containing complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8b0i, PDBe:8b0i, PDBj:8b0i
PDBsum8b0i
PubMed36504162
UniProtP0A894|RAPZ_ECOLI RNase adapter protein RapZ (Gene Name=rapZ)

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