Structure of PDB 8avm Chain D

Receptor sequence
>8avmD (length=192) Species: 817 (Bacteroides fragilis) [Search protein sequence]
MYEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGK
TVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAPKPAKNEPAGKLGEAIKR
DFGSFENFKKEFNAASVGLFGSGWAWLSVDKDGKLHITKEPNGSNPVRAG
LKPLLTCDVWEHAYYLDYQNRRADHVNKLWEIIDWDVVEKRL
3D structure
PDB8avm An ancient metalloenzyme evolves through metal preference modulation.
ChainD
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE D H26 H74 W124 D158 H162 H26 H74 W124 D158 H162
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals

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Molecular Function
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Biological Process
External links
PDB RCSB:8avm, PDBe:8avm, PDBj:8avm
PDBsum8avm
PubMed37037909
UniProtP53638|SODF_BACFR Superoxide dismutase [Fe] (Gene Name=sodB)

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