Structure of PDB 8agb Chain D

Receptor sequence
>8agbD (length=110) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
TDFQETFKTSKRAYFAQIEKYPKLKLIDTFCFFLVLLGVIQCTFIILIRD
NFPFNAFLAGFIICVGQFVLLMSLRLQLCNSFPGISKNRAFAEFIVASLI
LHFVCLHFIN
3D structure
PDB8agb Molecular basis for glycan recognition and reaction priming of eukaryotic oligosaccharyltransferase.
ChainD
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GLC D F72 P73 F74 F52 P53 F54
BS02 GLC D N75 N130 N55 N110
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0006486 protein glycosylation
GO:0006487 protein N-linked glycosylation
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0008250 oligosaccharyltransferase complex
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8agb, PDBe:8agb, PDBj:8agb
PDBsum8agb
PubMed36435935
UniProtP46964|OST2_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 (Gene Name=OST2)

[Back to BioLiP]