Structure of PDB 7ypr Chain D

Receptor sequence
>7yprD (length=164) Species: 947166 (Ramazzottius varieornatus) [Search protein sequence]
NYLFRGPVTAVAAIAGEGEHAGIKGSLTFLQKSLDGRTVINGTISGLPEG
KHGLHIHDSGDMTKGCYITTAKGHLNPFNLSHGAPSDSARHVGDLGNIYA
DDTGISVINLTDTVISLFPTPAFVIGRILVIHTTYDDLGRGGSPVSKVNG
NAGGRLACGIISYV
3D structure
PDB7ypr Structure of a superoxide dismutase from a tardigrade: Ramazzottius varieornatus strain YOKOZUNA-1.
ChainD
Resolution2.101 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D H104 H112 H121 D124 H74 H82 H91 D94
BS02 CU D H85 H87 H104 H162 H55 H57 H74 H132
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7ypr, PDBe:7ypr, PDBj:7ypr
PDBsum7ypr
PubMed37358501
UniProtA0A1D1VU85|SODC_RAMVA Superoxide dismutase [Cu-Zn] (Gene Name=RvY_13070)

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