Structure of PDB 7ypn Chain D

Receptor sequence
>7ypnD (length=455) Species: 357400 (Caulobacter sp. D5) [Search protein sequence]
HDIAELKRLDLAHHLPAFADHKVIAEQGGSRIITRAEGVYIHDGEGHQIL
DGWAGLFCVNVGYGREELAKAAYDQMLELPYYNTFFKTATPPPIELAAKI
AQKMGGHLSHVFYNSSGSEANDTVFRLVRHFWKLKGEPSRTVFISRWNAY
HGSTVAGVSLGGMKHMHKQGDLPIAGVEHVMQPYQFGDGFGEDPAAFRDR
AVQAIEDKILEVGPENVAAFIGEPVQGAGGVIIPPDGYWPAVEALCRKYG
ILLVCDEVACGFGRLGQWFGHQHYGIKPDLIAMAKGLSSGYLPISAVGVA
DHIVAELREKGGDFIHGFTYSGHPTAAAVALKNIEIMEREGLVERTRDET
GPYLAQALASLNDHPLVGEVRSLGLIGAVEIVREKGTNHRFLDKEGEAGP
IVRDLCIKNGLMVRAIRDSIVCCPPLIITKAQIDELVGIIRKSLDEAEPV
LRALK
3D structure
PDB7ypn Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
ChainD
Resolution2.049 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP D F325 T326 F318 T319
BS02 PLP D S123 G124 S125 Y157 H158 G159 E230 D263 V265 K292 S116 G117 S118 Y150 H151 G152 E223 D256 V258 K285
Gene Ontology
Molecular Function
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:7ypn, PDBe:7ypn, PDBj:7ypn
PDBsum7ypn
PubMed36300723
UniProtA0A318BC23

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