Structure of PDB 7yjm Chain D

Receptor sequence
>7yjmD (length=156) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
MANLYVKAVPPPDMNRNTEWFMYPGVWTTYMLILFFGWLVVLSVSGCSPG
MAWTVVNLAHFVVTYHSFHWMKGTPFADDQGIYNGLTWWEQMDNGQQLTR
NRKFLTLVPVVLYLIASHTTDYRHPWLFLNTLAVMVLVVAKFPNMHKVRI
FGINGD
3D structure
PDB7yjm Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
ChainD
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Q97 L98 K103 L107 L114 H118 Y122 Q97 L98 K103 L107 L114 H118 Y122
BS02 Z1T D N17 W20 T29 I33 W88 N17 W20 T29 I33 W88
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0006979 response to oxidative stress
GO:0010150 leaf senescence
GO:0030148 sphingolipid biosynthetic process
GO:0034976 response to endoplasmic reticulum stress
GO:0042742 defense response to bacterium
GO:0090156 intracellular sphingolipid homeostasis
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016020 membrane

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Cellular Component
External links
PDB RCSB:7yjm, PDBe:7yjm, PDBj:7yjm
PDBsum7yjm
PubMed36989369
UniProtQ9C5I0

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