Structure of PDB 7y6y Chain D

Receptor sequence
>7y6yD (length=72) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
RLGVCGSVWGQNDIAYRCRTCENDPTCAICVPCFQNGDHNSHDYSIIYTG
GGCCDCGDETAWKPDGFCSNHK
3D structure
PDB7y6y Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
ChainD
Resolution1.543 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN D C149 C172 C184 H187 C33 C56 C68 H71
BS02 ZN D C121 C146 C149 C170 C5 C30 C33 C54
BS03 ZN D C134 C137 H155 H158 C18 C21 H39 H42
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0061630 ubiquitin protein ligase activity
Biological Process
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway

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Molecular Function
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Biological Process
External links
PDB RCSB:7y6y, PDBe:7y6y, PDBj:7y6y
PDBsum7y6y
PubMed
UniProtF4KCC2|PRT6_ARATH E3 ubiquitin-protein ligase PRT6 (Gene Name=PRT6)

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