Structure of PDB 7y6m Chain D

Receptor sequence
>7y6mD (length=290) Species: 1409 (Bacillus sp. (in: firmicutes)) [Search protein sequence]
KETPESIQEIKAPELWSSGFKGKGITIAVLDTGCDTEHPDLKDQIIGGKN
FTDDDDGDAENVKDYNGHGTHVAGTIAATDQNGGILGVAPEAKLLIVKVL
GGENGSGKYEWIIDGINYAAEQKVDIISMSLGGPSNEPALQEAIQNAVKS
GVLVVCAAGNEGDGDERTEEFSYPAAYNEVIAVGSVSLARESSEFSNANK
EIDLVAPGEDILSTLPNHKYGRLTGTSMAAPHVSGALAIIKNAEEEAFQR
KLTEPEIYAQLVRRTLPLKQSKALVGNGFLYLTAPDVLLE
3D structure
PDB7y6m Intracellular Subtilisin from Bacillus sp.
ChainD
Resolution2.703 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide D D66 H103 L135 G140 G142 Y144 S165 L166 G167 G168 N195 S262 D31 H68 L100 G105 G107 Y109 S130 L131 G132 G133 N160 S227
BS02 CA D G197 D198 D200 T203 E205 G162 D163 D165 T168 E170
BS03 CA D N213 E214 V215 I216 D238 N178 E179 V180 I181 D203
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7y6m, PDBe:7y6m, PDBj:7y6m
PDBsum7y6m
PubMed
UniProtA0A7H0M7J5

[Back to BioLiP]