Structure of PDB 7vbm Chain D

Receptor sequence
>7vbmD (length=92) Species: 10090 (Mus musculus) [Search protein sequence]
RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAH
YNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS
3D structure
PDB7vbm Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
ChainD
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D R33 Y42 S56 R86 S87 R1 Y10 S24 R54 S55
BS02 dna D R33 K34 Y40 R1 K2 Y8
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:7vbm, PDBe:7vbm, PDBj:7vbm
PDBsum7vbm
PubMed34929737
UniProtQ9D2U9|H2B3A_MOUSE H2B.U histone 2 (Gene Name=H2bu2)

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