Structure of PDB 7vaz Chain D

Receptor sequence

>7vazD (length=213) Species: 10090 (Mus musculus) [Search protein sequence]

MEVKLLQSGGGLVQPGGSLKLSCAASGIDFSGYWMSWVRRAPGKGLEWIG
EITPDSSTINYAPSLKDEFIISRDNAKNTLYLQMTKVRSDDTALYYCVSY
YEGFAYWGQGTLVTVSAASTKGPSVFPLAPTSGGTAALGCLVKDYFPEPV
TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNH
KPSNTKVDKKVEP

3D structure

PDB

7vaz Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding

Chain

Resolution

2.73 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	G32 Y33 W34 E51 Y100 Y101 E102	G32 Y33 W34 E51 Y100 Y101 E102

External links

PDB	RCSB:7vaz, PDBe:7vaz, PDBj:7vaz
PDBsum	7vaz
PubMed

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