Structure of PDB 7u3a Chain D

Receptor sequence
>7u3aD (length=693) Species: 54571 (Streptomyces venezuelae) [Search protein sequence]
QVWPGQAYPLGATYDGAGTNFAVFSEAAHRIELCLLHDDGSETAVELRET
DAFVRHAYLPGVMPGQRYGFRVHGPYAPERGLRCNAAKLLLDPYARAVSG
RVRWGEAVYGYPFGRPDARNDLDSAPDTMTSVVVNPYFDWGDDRRPRTEY
HHTVIYEAHVKGLTMLHPDLPEELRGTYAGLAHPSVIGHLRELGVTALEL
MPVHQFVNDHRLVDAGLSNYWGYNTIGFFAPHNAYASWGDRGQQVLEFKS
AVRALHQAGIEVILDVVYNHTAEGNHLGPTLSMRGLDNPSYYRLADDPRY
YMDTTGTGNSLLMRSPHVLQLIMDSLRYWVTEMHVDGFRFDLAATLARQF
HEVDRLSSFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPPLWTEWNG
KYRDCVRDLWRGEPRTLAEFASRLTGSSDLYQDDGRRPLASVNFVTCHDG
FTLRDLVSYNEKRNEANGEGNRDGENYNRSWNCGEEGETEDVGITELRAR
QMRNFLATLMLSQGVPMLSHGDEFGRTQGGNNNAYCQDNEVSWVRWPKEA
EATLLRFTRSMVRLRREHPVFRRRRFFHGRPVLTDIAWFTPEGEEMTSRD
WQAAHAQALTVFLNGNAISEPGTQGERIADDSFLLMFNASAKELEFVVPH
GRYWRMVVDTSDPEGMPPQQGPELAGGERVTLAPLSLTVLRRP
3D structure
PDB7u3a Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
ChainD
Resolution3.34 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 C2E D R438 R579 F580 R437 R575 F576
BS02 C2E D R31 E47 R49 E50 T51 R56 R30 E46 R48 E49 T50 R55
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004133 glycogen debranching enzyme activity
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0005980 glycogen catabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7u3a, PDBe:7u3a, PDBj:7u3a
PDBsum7u3a
PubMed36192422
UniProtA0A5P2ALW6

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