Structure of PDB 7u1a Chain D

Receptor sequence
>7u1aD (length=340) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLF
YGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNF
ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGV
TRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCD
DGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV
PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDN
FDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL
3D structure
PDB7u1a A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
ChainD
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D I103 R107 I90 R94
BS02 AGS D V28 R32 P33 G68 T69 G70 K71 T72 S73 N171 L228 R229 I232 V15 R19 P20 G55 T56 G57 K58 T59 S60 N158 L215 R216 I219
BS03 MG D T72 D140 T59 D127
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003689 DNA clamp loader activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0000076 DNA replication checkpoint signaling
GO:0000077 DNA damage checkpoint signaling
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0006272 leading strand elongation
GO:0006281 DNA repair
GO:0006298 mismatch repair
GO:0007062 sister chromatid cohesion
GO:0007064 mitotic sister chromatid cohesion
GO:0090618 DNA clamp unloading
Cellular Component
GO:0005634 nucleus
GO:0005663 DNA replication factor C complex
GO:0031389 Rad17 RFC-like complex
GO:0031390 Ctf18 RFC-like complex
GO:0031391 Elg1 RFC-like complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7u1a, PDBe:7u1a, PDBj:7u1a
PDBsum7u1a
PubMed35731107
UniProtP40348|RFC2_YEAST Replication factor C subunit 2 (Gene Name=RFC2)

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