Structure of PDB 7tgk Chain D

Receptor sequence
>7tgkD (length=593) Species: 35619 (Streptomyces griseoflavus) [Search protein sequence]
HMSLTDAVAHLSPERWEEANRLLVRKALAEFAHERLFTPEPADGQDGRYV
VRSDDGLTSYRFTAVRRALDHWQVDAGSITRTRDGAELPLAALDFFIELR
HTLGLSDEILPVYLEEISSTLSGTCYKLTKPQVTAAGLLEGGFQALESGM
TEGHPCFVANNGRLGFGVDEYLAYAPETAHPVRLVWLAAHRSRAAFTAGA
GIDYASFVRQELGEETVERFDGVLRGRGLDPADYLLIPVHPWQWWNKLSV
TFAAEVARQNLVCLGESDDEYLAQQSIRTFFNATHPEKHYVKTALSVLNM
GFMRGLSAAYMEATPAINDWLDRLIDNDPVLKSTGLSIIRERAAVGYRHL
EYEAATDRYSPYRKMLAALWRESPVPALRDGESLTTMAALVHVDHEGRSV
AGELIARSGLAPTAWLRHYLRAYYTPLLHSFYAYDLAFMPHGENTILVLK
DGVVQRAVYKDIAEEIVVMDPDAVLPPEVRRVRAEVPEDMKLLSIFTDVF
DCFFRFLAAGLATEEVLAEDDFWRTVAEVTREYQEAHPELDDRFRQYDLF
APEFALSCLNRLQLRDNRQMVDLADPSAALQLVGTLRNPLAGL
3D structure
PDB7tgk An acyl-adenylate mimic reveals the structural basis for substrate recognition by the iterative siderophore synthetase DesD.
ChainD
Resolution2.3 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP D G152 H153 S275 R277 T278 K291 N298 M299 R303 R370 H440 E442 N443 D460 G153 H154 S276 R278 T279 K292 N299 M300 R304 R371 H441 E443 N444 D461
BS02 MG D D460 E463 E464 D461 E464 E465
BS03 MG D E442 N443 D460 E443 N444 D461
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 17:30:42 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7tgk', asym_id = 'D', title = 'An acyl-adenylate mimic reveals the structural b...ion by the iterative siderophore synthetase DesD.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7tgk', asym_id='D', title='An acyl-adenylate mimic reveals the structural b...ion by the iterative siderophore synthetase DesD.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0019290', uniprot = '', pdbid = '7tgk', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0019290', uniprot='', pdbid='7tgk', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>