Structure of PDB 7syp Chain D

Receptor sequence
>7sypD (length=221) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
KEWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVL
KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIIL
AKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSA
PVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWK
ETVFTKSPYQEFTDHLVKTHT
3D structure
PDB7syp Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
ChainD
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D V112 Q113 K114 Q115 R117 A118 K125 T185 R187 G189 S190 R194 V205 S206 Y223 A226 R227 C229 T230 T232 N235 K238 Y250 V55 Q56 K57 Q58 R60 A61 K68 T128 R130 G132 S133 R137 V148 S149 Y166 A169 R170 C172 T173 T175 N178 K181 Y193
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7syp, PDBe:7syp, PDBj:7syp
PDBsum7syp
PubMed35822879
UniProtG1SV32|RL7_RABIT Large ribosomal subunit protein uL30 (Gene Name=RPL7)

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