Structure of PDB 7sym Chain D

Receptor sequence
>7symD (length=221) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
KEWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVL
KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIIL
AKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSA
PVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWK
ETVFTKSPYQEFTDHLVKTHT
3D structure
PDB7sym Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway
ChainD
Resolution4.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D V112 Q113 K114 Q115 T116 R117 A118 R123 T185 R187 G189 S190 L192 R194 I196 V205 S206 A207 Y223 T224 R227 T230 A231 N235 V55 Q56 K57 Q58 T59 R60 A61 R66 T128 R130 G132 S133 L135 R137 I139 V148 S149 A150 Y166 T167 R170 T173 A174 N178
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7sym, PDBe:7sym, PDBj:7sym
PDBsum7sym
PubMed
UniProtG1SV32|RL7_RABIT Large ribosomal subunit protein uL30 (Gene Name=RPL7)

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