Structure of PDB 7s78 Chain D

Receptor sequence
>7s78D (length=929) Species: 28285 (Human adenovirus 5) [Search protein sequence]
TPSMMPQWSYMHISGQDASEYLSPGLVQFARATETYFSLNNKFRNPTVAP
THDVTTDRSQRLTLRFIPVDREDTAYSYKARFTLAVGDNRVLDMASTYFD
IRGVLDRGPTFKPYSGTAYNALAPKGAPNPCEWDEAATAAEQQKTHVFGQ
APYSGINITKEGIQIGVEGQTPKYADKTFQPEPQIGESQWYETEINHAAG
RVLKKTTPMKPCYGSYAKPTNENGGQGILVKQQNGKLESQVEMQFFSTTE
ATAGNGDNLTPKVVLYSEDVDIETPDTHISYMPTIKEGNSRELMGQQSMP
NRPNYIAFRDNFIGLMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQ
LLLDSIGDRTRYFSMWNQAVDSYDPDVRIIENHGTEDELPNYCFPLGGVI
NTETLTKVKPKTGQENGWEKDATEFSDKNEIRVGNNFAMEINLNANLWRN
FLYSNIALYLPDKLKYSPSNVKISDNPNTYDYMNKRVVAPGLVDCYINLG
ARWSLDYMDNVNPFNHHRNAGLRYRSMLLGNGRYVPFHIQVPQKFFAIKN
LLLLPGSYTYEWNFRKDVNMVLQSSLGNDLRVDGASIKFDSICLYATFFP
MAHNTASTLEAMLRNDTNDQSFNDYLSAANMLYPIPANATNVPISIPSRN
WAAFRGWAFTRLKTKETPSLGSGYDPYYTYSGSIPYLDGTFYLNHTFKKV
AITFDSSVSWPGNDRLLTPNEFEIKRSVDGEGYNVAQCNMTKDWFLVQML
ANYNIGYQGFYIPESYKDRMYSFFRNFQPMSRQVVDDTKYKDYQQVGILH
QHNNSGFVGYLAPTMREGQAYPANFPYPLIGKTAVDSITQKKFLCDRTLW
RIPFSSNFMSMGALTDLGQNLLYANSAHALDMTFEVDPMDEPTLLYVLFE
VFDVVRVHRPHRGVIETVYLRTPFSAGNA
3D structure
PDB7s78 Structure of a Cell Entry Defective Human Adenovirus Provides Insights into Precursor Proteins and Capsid Maturation.
ChainD
Resolution3.72 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Q29 A31 R32 T36 Y37 N41 R45 N46 Q28 A30 R31 T35 Y36 N40 R44 N45
BS02 peptide D D18 T48 V49 P51 N643 Y645 L646 R871 S880 E920 D17 T47 V48 P50 N623 Y625 L626 R851 S860 E900
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7s78, PDBe:7s78, PDBj:7s78
PDBsum7s78
PubMed34774568
UniProtP04133|CAPSH_ADE05 Hexon protein (Gene Name=L3)

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