Structure of PDB 7s01 Chain D

Receptor sequence
>7s01D (length=631) Species: 1815509 (Bacillus phage AR9) [Search protein sequence]
MEKTYNLNDILLSNEYEKIKEDIKEEIINDMASKKVKYSNTSEFAKNDFL
KDEFIDLVVDGETYEITYGNLITLLIVARPFNHFKVPMTEDLLFDLSDLK
EYQNYYTTLLEHFGYSNEIKSIIKDVISELAIFSGDINVTFGNTVSIKSL
IDLGNKVKRFRELLHYRLPNDEALEFNDIEAIIKKNLDEIMKILSETDNM
LRYYIDSGAGINSKQFGQVLSLVGSKPDLFGKIIPYPINTSFLRGLDVRS
FYINALGARKALITNYQQVRNSGYLTRKISMLLMDTKLIDLDDCGSHENN
YLSINVENKDVLKRFSKRSYLNNNGELVEIDINDESLIGQVIKIPSPTTC
ASNEGVCRKCYGKLFDINKDLNIGMIAVLLLTDPLTQRLLSAKHLLETRS
SKIDWGTNFEENFIVNRNLIYPKVYNGTVIIKEDDFKEDEETEEQVFDTF
TLKSGNRFISISSPMRLFLNKDLKKQLDESFYNIEEMQFEIPLNKLDEGD
SFATFIMDNNELSKPLREIKDLIETNKYIKDHNVNEVVNYFIYLLNESGI
NIQSVHSELIIREMMKLDDSDRTQFKNDKMPDYEIFRITDANLKGDSLSR
SLLFEQVKKQLTTLDYDTFNKTKSSILDKLL
3D structure
PDB7s01 Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase.
ChainD
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D Y266 V269 R270 Y274 E605 Q606 K608 K609 Y266 V269 R270 Y274 E605 Q606 K608 K609
BS02 ZN D C294 C350 C357 C360 C294 C350 C357 C360
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7s01, PDBe:7s01, PDBj:7s01
PDBsum7s01
PubMed35725571
UniProtA0A172JI62

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