Structure of PDB 7rdv Chain D

Receptor sequence

>7rdvD (length=240) Species: 10090 (Mus musculus) [Search protein sequence]

AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGA
GSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGGQSNERLF
FGHGTKLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDH
VELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNP
RNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD

3D structure

PDB

7rdv TFH TCR bound to MHC Class II IAd presenting aggrecan epitope

Chain

Resolution

2.90007 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	D	N28 Q109 N111	N26 Q94 N96

External links

PDB	RCSB:7rdv, PDBe:7rdv, PDBj:7rdv
PDBsum	7rdv
PubMed

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