Structure of PDB 7r06 Chain D

Receptor sequence
>7r06D (length=598) Species: 1358 (Lactococcus lactis) [Search protein sequence]
SMKKEFTELYDFIFDPIFLVRYGYYDRSIKNKKMNTAKVELDNEYGKSDS
FYFKVFNMESFADYLRSHDLKTHFNGKKPLSTDPVYFNIPKNIEARRQYK
MPNLYSYMALNYYICDNKKEFIEVFIDNKFSTSKFFNQLNFDYPKTQEIT
QTLLYGGIKKLHLDLSNFYHTLYTHSIPWMIDGKSASKQKKGFSNTLDTL
ITACQYDETHGIPTGNLLSRIITELYMCHFDKQMEYKKFVYSRYVDDFIF
PFTFENEKQEFLNEFNLICRENNLIINDNKTKVDNFPFVDKSSKSDIFSF
FENITSTNSNDKWIKEISNFIDYCVNEEHLGNKGAIKCIFPVITNTLKQK
KVDTKNIDNIFSKRNMVTNFNVFEKILDLSLKDSRLTNKFLTFFENINEF
GFSSLSASNIVKKYFSNNSKGLKEKIDHYRKNNFNQELYQILLYMVVFEI
DDLLNQEELLNLIDLNIDDYSLILGTILYLKNSSYKLEKLLKKIDQLFIN
THANYDVKTSRMAEKLWLFRYFFYFLNCKNIFSQKEINSYCQSQNYNSGQ
NGYQTELNWNYIKGQGKDLRANNFFNELIVKEVWLISCGENEDFKYLN
3D structure
PDB7r06 Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
ChainD
Resolution2.27 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D N30 K32 M33 Y44 K46 R96 Y98 Y142 T145 Q146 Y168 Y245 D247 K295 F299 K334 G335 K338 C339 V343 N346 K390 N31 K33 M34 Y45 K47 R97 Y99 Y143 T146 Q147 Y169 Y244 D246 K294 F298 K333 G334 K337 C338 V342 N345 K389
BS02 dna D S310 K316 S309 K315
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006974 DNA damage response

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Molecular Function
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Biological Process
External links
PDB RCSB:7r06, PDBe:7r06, PDBj:7r06
PDBsum7r06
PubMed36107766
UniProtQ48614

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