Structure of PDB 7qqa Chain D

Receptor sequence
>7qqaD (length=273) Species: 354 (Azotobacter vinelandii) [Search protein sequence]
TRKVAIYGKGGIGKSTTTQNTAAALAYFHDKKVFIHGCDPKADSTRLILG
GKPQETLMDMLRDKGAEKITNDDVIKKGFLDIQCVESGGPEPGVGCAGRG
VITAIDLMEENGAYTDDLDFVFFDVLGDVVCGGFAMPIRDGKAQEVYIVA
SGEMMAIYAANNICKGLVKYAKQSGVRLGGIICNSRKVDGEREFLEEFTA
AIGTKMIHFVPRDNIVQKAEFNKKTVTEFAPEENQAKEYGELARKIIEND
EFVIPKPLTMDQLEDMVVKYGIA
3D structure
PDB7qqa MgADP-bound Fe protein of the iron-only nitrogenase from Azotobacter vinelandii
ChainD
Resolution1.79 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.18.6.1: nitrogenase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SF4 D C97 A98 C132 G133 C96 A97 C131 G132
BS02 ADP D G12 G14 K15 S16 T17 N185 P212 R213 D214 V217 Q218 E221 G11 G13 K14 S15 T16 N184 P211 R212 D213 V216 Q217 E220
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016163 nitrogenase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0009399 nitrogen fixation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7qqa, PDBe:7qqa, PDBj:7qqa
PDBsum7qqa
PubMed
UniProtC1DK95

[Back to BioLiP]