Structure of PDB 7qoh Chain D

Receptor sequence
>7qohD (length=456) Species: 2301731 (Bacteroides phage crAss001) [Search protein sequence]
AGKLGKFQMLGFQHWAPQKATNLMVQLLAFYRGKSLDTFLNSFPTREFED
DNEYYWDVIGSSRRNIPLVEARDENGVVVAANAANVGVGTSPFYLVFPED
WFADGEVIVGNLNQVYPFRILGDARMEGTNAVYKVELMGGNTQGVPAERL
QQGERFSIEFAPVEKELSRKVGDVRFTSPVSMRNEWTTIRIQHKVGNKLN
KKLAMGIPMVRNLWMHYVDWEVELQFDEYKNNAMAWGTSNRNLNGEYMNF
GKSGNAIKTGAGIFEQTEVANTMYYNTFSLKLLEDALYELSASKLAMDDR
LFVIKTGERGAIQFHKEVLKTVSGWTTFVLDNNSTRVVEKVQSRLHSNAL
SAGFQFVEYKAPNGVRVRLDVDPFYDDPVRNKILHPMGGVAFSYRYDIWY
IGTMDQPNIFKCKIKGDNEYRGYQWGSAVIHRMATLGVCVLDPTRTMSLI
PAILQG
3D structure
PDB7qoh Structural atlas of a human gut crassvirus.
ChainD
Resolution3.32 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D M40 Q42 R48 G49 K50 S51 T54 W243 M244 H245 Y246 W249 P402 M24 Q26 R32 G33 K34 S35 T38 W214 M215 H216 Y217 W220 P373
BS02 MG D T296 A299 P491 T494 T267 A270 P443 T446
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:7qoh, PDBe:7qoh, PDBj:7qoh
PDBsum7qoh
PubMed37138077
UniProtA0A385DVU6|CAPSD_BPCA1 Major capsid protein (Gene Name=crAss001_32)

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