Structure of PDB 7pmq Chain D

Receptor sequence
>7pmqD (length=455) Species: 562 (Escherichia coli) [Search protein sequence]
AFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSG
KTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVM
DEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDP
LAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKK
DCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAA
RGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQR
ANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLG
ALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCR
VRLLK
3D structure
PDB7pmq Structural basis for RNA-duplex unwinding by the DEAD-box helicase DbpA.
ChainD
Resolution3.22 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Interaction with ligand
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0019843 rRNA binding
GO:0033677 DNA/RNA helicase activity
GO:0034458 3'-5' RNA helicase activity
GO:0043531 ADP binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7pmq, PDBe:7pmq, PDBj:7pmq
PDBsum7pmq
PubMed37221012
UniProtP21693|DBPA_ECOLI ATP-dependent RNA helicase DbpA (Gene Name=dbpA)

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