Structure of PDB 7pib Chain D

Receptor sequence
>7pibD (length=153) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence]
FEERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAI
KKAIKAAHNSLHTIEIHKGSIYHEVIGRSGASRVLLKPAPQGTGIIAGGA
IRAIIELAGYSDIYTKNLGRNTPINMIHATMDGILKQLSPRRVAILRNKN
LNE
3D structure
PDB7pib Visualizing translation dynamics at atomic detail inside a bacterial cell.
ChainD
Resolution4.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D K78 T79 T80 K81 R84 K107 K117 R143 A146 L150 K152 P155 T158 I161 A162 G163 K181 L183 R185 N186 T187 N190 H193 K13 T14 T15 K16 R19 K42 K52 R78 A81 L85 K87 P90 T93 I96 A97 G98 K116 L118 R120 N121 T122 N125 H128
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7pib, PDBe:7pib, PDBj:7pib
PDBsum7pib
PubMed36171285
UniProtQ50301|RS5_MYCPN Small ribosomal subunit protein uS5 (Gene Name=rpsE)

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