Structure of PDB 7phf Chain D

Receptor sequence
>7phfD (length=330) Species: 1924,1950,1114943 [Search protein sequence]
IDALRTLIRLGSLHTPMVVRTAATLRLVDHILAGARTVKALAARTDTRPE
ALLRLIRHLVAIGLLEEDAPGEFVPTEVGELLADDHPAAQRAWHDLTQAV
ARADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLMTTR
EDTAFAAPAAAYDWTNVRHVLDVGGGNGGFAAAIARRAPHVSATVLEMAG
TVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDA
VRILTRCAEALEPGGRILIHERADGADRFFSTLLDLRMLVFLGGALRTRE
KWDGLAASAGLVVEEVRLPLDSCLLVLAPA
3D structure
PDB7phf Evolution-inspired engineering of anthracycline methyltransferases.
ChainD
Resolution2.21 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.292: carminomycin 4-O-methyltransferase.
4.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SAH D P355 A356 P329 A330
BS02 SAH D Y143 R153 F156 G187 G188 E210 M211 G236 D237 F238 S252 F253 Y130 R140 F143 G174 G175 E197 M198 G223 D224 F225 S239 F240
BS03 VAK D W106 F156 M160 R163 F253 N257 L302 L303 R306 M307 L346 W93 F143 M147 R150 F240 N244 L283 L284 R287 M288 L320
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0008171 O-methyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:7phf, PDBe:7phf, PDBj:7phf
PDBsum7phf
PubMed36874276
UniProtI2N5E8;
Q06528|DNRK_STRPE Carminomycin 4-O-methyltransferase DnrK (Gene Name=dnrK);
Q54527|RDMB_STREF Aclacinomycin 10-hydroxylase RdmB (Gene Name=rdmB)

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