Structure of PDB 7pel Chain D

Receptor sequence
>7pelD (length=258) Species: 33747 (Simian T-lymphotropic virus 1) [Search protein sequence]
SPAKLHSFTHCGQAALTLHGATTTEALNILHSCHACRIRRGLLPNHIWQG
DITHFKYKNTLYRLHVWVDTFSGSVSATHKKRETSSEAISSLLHAIAHLG
RPSHINTDNGPAYASQEFQHACTSLAIRHTTHIPVERTNGILKTLLYKYF
SDNPNLPMDNALSVALWTINHLNVLTHCQKTRWQLHHSPRLPPIPEAKPV
TTSKTHWYYFKIPGLNSRQWKGPQRALQEAAGAALIPVSDTAAQWIPWKL
LKRAVCPR
3D structure
PDB7pel Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56gamma.
ChainD
Resolution3.34 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D S239 Q241 S217 Q219
BS02 ZN D H8 H12 C35 H6 H10 C33
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Biological Process
GO:0015074 DNA integration

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Molecular Function
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Biological Process
External links
PDB RCSB:7pel, PDBe:7pel, PDBj:7pel
PDBsum7pel
PubMed33028863
UniProtQ4QY51

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