Structure of PDB 7oqy Chain D

Receptor sequence
>7oqyD (length=258) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence]
MPISLIERNGLRLRLVLENYPLEFVNSIRRASILYVPVMAVDEVYFIENN
SPLYDEILAHRLALVPFVSDEALEHYRPPEECCDGCYNRVYLDVEAKDQP
LMIYSRDLKSEDQMITPVSGAIPIVLLGSKQKISLEARLRLGYGKEHIKY
SPVSVSIVRYYPKVTVLGNCEKAVEVCPEGVFAMENNKLVVKNELSCILC
EECLKYCAGSVSIESVENKFILEIESVGSLKPERILIEASKSLLRKLSEL
KSKLEAGK
3D structure
PDB7oqy Structural basis of RNA polymerase inhibition by viral and host factors.
ChainD
Resolution2.61 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 F3S D C183 C203 I204 L205 C206 E207 E208 C209 I219 C177 C197 I198 L199 C200 E201 E202 C203 I213
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
GO:0051536 iron-sulfur cluster binding
GO:0051538 3 iron, 4 sulfur cluster binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oqy, PDBe:7oqy, PDBj:7oqy
PDBsum7oqy
PubMed34535646
UniProtP39471|RPO3_SULAC DNA-directed RNA polymerase subunit Rpo3 (Gene Name=rpo3)

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