Structure of PDB 7mdy Chain D

Receptor sequence
>7mdyD (length=227) Species: 562 (Escherichia coli) [Search protein sequence]
KILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLL
HLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
TALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQ
RVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVV
THDLQLAKRMSRQLEMRDGRLTAELSM
3D structure
PDB7mdy Mechanism of LolCDE as a molecular extruder of bacterial triacylated lipoproteins
ChainD
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 7.6.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AOV D Y15 G45 S46 G47 K48 S49 T50 Q94 E171 H204 Y13 G43 S44 G45 K46 S47 T48 Q92 E169 H202
BS02 MG D S49 Q94 S47 Q92
BS03 AOV D R138 H141 E145 S147 G148 G149 N175 R136 H139 E143 S145 G146 G147 N173
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0022857 transmembrane transporter activity
GO:0140306 lipoprotein releasing activity
Biological Process
GO:0044873 lipoprotein localization to membrane
GO:0044874 lipoprotein localization to outer membrane
GO:0055085 transmembrane transport
GO:0089705 protein localization to outer membrane
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0043190 ATP-binding cassette (ABC) transporter complex
GO:0098797 plasma membrane protein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7mdy, PDBe:7mdy, PDBj:7mdy
PDBsum7mdy
PubMed
UniProtP75957|LOLD_ECOLI Lipoprotein-releasing system ATP-binding protein LolD (Gene Name=lolD)

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