Structure of PDB 7mdn Chain D

Receptor sequence
>7mdnD (length=130) Species: 9606 (Homo sapiens) [Search protein sequence]
DHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKKSARQYHVQFF
GDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQATKAEKIKLLKPISGKL
RAQWEMGIVQAEEAASMSVEERKAKFTFLY
3D structure
PDB7mdn A chemical probe targeting the PWWP domain alters NSD2 nucleolar localization.
ChainD
Resolution2.42 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.357: [histone H3]-lysine(36) N-dimethyltransferase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 Y6V D K317 A320 K99 A102
BS02 Y6V D V230 Y233 W236 F266 F267 G268 A270 E272 L318 Q321 V16 Y19 W22 F49 F50 G51 A53 E55 L100 Q103
External links
PDB RCSB:7mdn, PDBe:7mdn, PDBj:7mdn
PDBsum7mdn
PubMed34782742
UniProtO96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 (Gene Name=NSD2)

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