Structure of PDB 7drp Chain D

Receptor sequence
>7drpD (length=296) Species: 391625 (Plesiocystis pacifica SIR-1) [Search protein sequence]
SHMTNLDTSIVVVGSPDDLHVQSVTEGLRARGHEPYVFDTQRFPEEMTVS
LGEQGASIFVDGQQIARPAAVYLRSLVDADKAMQDNWRRTLLAFRERSTL
MSAVLLRWEEAGTAVYNSPRASANITKPFQLALLRDAGLPVPRSLWTNDP
EAVRRFHAEVGDCIYKPVAGGARTRKLEAKDLEADRIERLSAAPVCFQEL
LTGDDVRVYVIDDQVICALRIERIEAIEISDEVKDQCVRAAKLVGLRYTG
MDIKAGADGNYRVLELNASAMFRGFEGRANVDICGPLCDALIAQTK
3D structure
PDB7drp Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
ChainD
Resolution2.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D R95 L98 R89 L92
BS02 ADP D I170 K172 T180 Q204 E205 L207 D211 D269 K271 L281 E282 I164 K166 T174 Q198 E199 L201 D205 D252 K254 L264 E265
BS03 MG D D269 E282 D252 E265
BS04 MG D E282 N284 E265 N267
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016879 ligase activity, forming carbon-nitrogen bonds
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:7drp, PDBe:7drp, PDBj:7drp
PDBsum7drp
PubMed34475564
UniProtA6G4D7

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